PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011098250.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 432aa    MW: 46956.2 Da    PI: 6.3687
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011098250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1128.7e-3535151289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssaseceaessss 80 
                     +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++                + +++++ e+e++++
  XP_011098250.1  35 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELpawhptnyyapnasfgPEDAQKKLEEEEEEE 129
                     79**************************************************************7666666555555332222222222222222 PP

             TCP  81 sasnsssg.............k 89 
                      +++++++             +
  XP_011098250.1 130 HQEQHGIHqadlmdsnvsgsaS 151
                     2222223233333333333221 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.8E-3335152IPR005333Transcription factor, TCP
PROSITE profilePS5136933.2733795IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MGESNHRHST SSRLGLKTSV GEIVEVQGGH IVRSTGRKDR HSKVCTAKGP RDRRVRLAAH  60
TAIQFYDVQD RLGYDRPSKA VDWLIKKAKA AIDELAELPA WHPTNYYAPN ASFGPEDAQK  120
KLEEEEEEEH QEQHGIHQAD LMDSNVSGSA SKRAMAMLGG EDENSNRQNS SFLPPSLDSD  180
VIADTIKSFF PVGASDEASS SAMQFQSFSS PDLLSRSSSH SQDLRLSLQS FQDPTYLHHH  240
TQHPQNPSNH DEQVNSQTHF QGQFLLSGTP LGFDGTAGWA ENHQQAVELG RFQRLAAWNA  300
GGETGSGSAG GAASAGYLFN SPPAPQPLLQ QLFGHNQIFT QRGPLQSSNS PSVRAWMDPS  360
AVAISNADHS LQRPHHHPGV LPVYPSSVSG IGFASGFSGF PGFHIPARIQ GDDEERDGYS  420
DKPSSASSDS RH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098249.10.0PREDICTED: transcription factor TCP4
RefseqXP_011098250.10.0PREDICTED: transcription factor TCP4
RefseqXP_011098251.10.0PREDICTED: transcription factor TCP4
SwissprotQ8LPR51e-104TCP4_ARATH; Transcription factor TCP4
TrEMBLA0A0M4MCU80.0A0A0M4MCU8_9LAMI; TCP transcription factor CIN2A
STRINGPGSC0003DMT4000322681e-154(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.34e-73TCP family protein